Visium
Human temporal cortex
GSM8893118
bronze Interactive viewer H&E Lewy body dementia Provisional
print(sdata)
SpatialData object
├── Images
│ ├── 'GSM8893118_LBD12_hires_image': DataArray[cyx] (3, 1720, 2000)
│ └── 'GSM8893118_LBD12_lowres_image': DataArray[cyx] (3, 516, 600)
├── Shapes
│ └── 'GSM8893118_LBD12': GeoDataFrame shape: (10187, 2) (2D shapes)
└── Tables
└── 'table': AnnData (10187, 18085)
with coordinate systems:
▸ 'GSM8893118_LBD12', with elements:
GSM8893118_LBD12_hires_image (Images), GSM8893118_LBD12_lowres_image (Images), GSM8893118_LBD12 (Shapes)
▸ 'GSM8893118_LBD12_downscaled_hires', with elements:
GSM8893118_LBD12_hires_image (Images), GSM8893118_LBD12 (Shapes)
▸ 'GSM8893118_LBD12_downscaled_lowres', with elements:
GSM8893118_LBD12_lowres_image (Images), GSM8893118_LBD12 (Shapes) Load in Python
import lamindb as ln
db = ln.DB("scverse/spatialdata-db")
artifact = db.Artifact.get("fMtJuxWnL0UIaDrJ") # latest version
sdata = artifact.load() # cache, then load into memory
group = artifact.open() # stream without downloading
path = artifact.cache() # sync into the local cache, returns the path Load from the CLI
# one-shot: cache the dataset and print its local path
lamin load https://lamin.ai/scverse/spatialdata-db/artifact/fMtJuxWnL0UIaDrJ
# or connect once, then load by uid
lamin connect scverse/spatialdata-db
lamin load artifact --uid fMtJuxWnL0UIaDrJ Load with the Python client
# pip install git+https://github.com/theislab/spatialdata-db-client
from sddb import Catalog
ds = Catalog().cohort(uids=["fMtJuxWnL0UIaDrJ0000"])[0]
ds.elements() # inspect without downloading
sdata = ds.load(lazy=False) # copy to the local cache and openPart of collection
Spatial transcriptomics Reveals Impact of APOE4 Allele on α-Synuclein Aggregation and Cell-Cell Communication in Lewy Body Dementia→ 10 datasets · comparison
Metadata
- Technology
- Visium
- Organism
- human
- Tissue
- temporal cortex
- Condition
- Lewy body dementia
- Modality
- RNA
- Observations
- 10,187
- Tier
- bronze
- Chemistry
- Visium v1
- Magnification
- other
- Resolution
- 2,000 × 1,720 px
- mpp
- 11.277 µm/px
- Size
- 100 MB
- Sample ID
- GSM8893118
- License
- unknown
- Published
- Feb 2, 2026
Cite this dataset
No linked publication found — please cite the data source: NCBI GEO ↗.
Source: NCBI GEO ↗ · Reprocessed to SpatialData by SpatialData-DB