Collections / Prostate ST Internal

Prostate ST Internal

Datasets5
Size~2.6 GB
AssayVisium
Samplehuman · prostate gland
KindOther
Python · lamindb
import lamindb as ln
import spatialdata as sd

coll = ln.Collection.get(key="hest-prostate-st-internal")
coll.ordered_artifacts.df()                 # the 5 members, ordered

# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]

# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()}
Open in Vitessce
Visium
Human prostate gland
INT25
human prostate gland prostate adenocarcinoma 522 MB 3,808 obs silver H&E
TechnologyVisium
Organismhuman
Tissueprostate gland
Conditionprostate adenocarcinoma
Size522 MB
Obs3,808
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human prostate gland
INT27
human prostate gland prostate adenocarcinoma 583 MB 4,176 obs silver H&E
TechnologyVisium
Organismhuman
Tissueprostate gland
Conditionprostate adenocarcinoma
Size583 MB
Obs4,176
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human prostate gland
INT35
human prostate gland prostate adenocarcinoma 524 MB 3,998 obs silver H&E
TechnologyVisium
Organismhuman
Tissueprostate gland
Conditionprostate adenocarcinoma
Size524 MB
Obs3,998
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human prostate gland
INT28
human prostate gland prostate adenocarcinoma 526 MB 3,990 obs silver H&E
TechnologyVisium
Organismhuman
Tissueprostate gland
Conditionprostate adenocarcinoma
Size526 MB
Obs3,990
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human prostate gland
INT26
human prostate gland prostate adenocarcinoma 508 MB 3,894 obs silver H&E
TechnologyVisium
Organismhuman
Tissueprostate gland
Conditionprostate adenocarcinoma
Size508 MB
Obs3,894
silver H&E Open in Vitessce