10x Xenium Human skin of body
GSM9902815
human skin of body keloid 1.5 GB 64,091 obs silver
Technology10x Xenium
Organismhuman
Tissueskin of body
Conditionkeloid
Obs64,091
silver
Collections / Xenium spatial transcriptomics identifies mesenchymal fibroblast expansion and conserved fibrotic ECM programs in keloid
Xenium spatial transcriptomics identifies mesenchymal fibroblast expansion and conserved fibrotic ECM programs in keloid
In this study, we applied single-cell-resolution targeted Xenium spatial transcriptomics (Xenium ST) to define keloid-associated cellular and molecular programs within intact tissue architecture, with a focus on fibroblast populations and conserved pro-fibrotic gene programs linked to ECM remodeling across diverse ancestry.
Datasets2
Size~4.0 GB
Assay10x Xenium
Samplehuman · skin of body
KindComparison
Download the whole collection
Python · lamindb
import lamindb as ln
import spatialdata as sd
coll = ln.Collection.get(key="geo-gse341250")
coll.ordered_artifacts.df() # the 2 members, ordered
# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]
# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()}Member datasets · 2
10x Xenium 
10x Xenium Human skin of body
GSM9902814
human skin of body keloid 2.5 GB 86,647 obs silver
Technology10x Xenium
Organismhuman
Tissueskin of body
Conditionkeloid
Obs86,647
silver
Cite this collection
No linked publication found — please cite the data source.