Collections / geo-gse345644

geo-gse345644

Datasets1
Size~1.2 GB
Assay10x Xenium
Samplehuman · urinary bladder
KindOther
Python · lamindb
import lamindb as ln
import spatialdata as sd

coll = ln.Collection.get(key="geo-gse345644")
coll.ordered_artifacts.df()                 # the 1 members, ordered

# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]

# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()}
Open in Vitessce
10x Xenium
Human urinary bladder
GSM10012265
human urinary bladder 1.2 GB 89,585 obs silver NCBI GEO policy
Technology10x Xenium
Organismhuman
Tissueurinary bladder
Size1.2 GB
Obs89,585
silver NCBI GEO policy Open in Vitessce