Collections / Epicardial fat drives macrophage response in atrial cardiomyopathy
Epicardial fat drives macrophage response in atrial cardiomyopathy
Inflammation contributes to atrial fibrillation (AF) and atrial cardiomyopathy (ACM). Spatial transcriptomic profiling of human right atrial appendage FFPE sections identified macrophage-associated fibro-fatty remodeling and inflammatory gene expression patterns associated with atrial adiposity during ACM progression.
Datasets4
Size~91 MB
AssayVisium
Samplehuman · right atrium auricular region
KindOther
Download the whole collection
Python · lamindb
import lamindb as ln
import spatialdata as sd
coll = ln.Collection.get(key="geo-gse331446")
coll.ordered_artifacts.df() # the 4 members, ordered
# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]
# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()} Member datasets · 4
Cite this collection
No linked publication found — please cite the data source.