Collections / Mouse uterine gene expressions during decidual processes [Visium]
Mouse uterine gene expressions during decidual processes [Visium]
Spatiotemporal uterine gene expressions during peri-implantation period at pregnancy day 4 and 6 was investigated by scRNA-seq and Visium spatial transcriptome.
Datasets4
Size~85 MB
AssayVisium
Samplemouse · uterus
KindComparison
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Python · lamindb
import lamindb as ln
import spatialdata as sd
coll = ln.Collection.get(key="geo-gse296581")
coll.ordered_artifacts.df() # the 4 members, ordered
# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]
# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()} Member datasets · 4
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