Collections / Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front

Spatially resolved chimeric analysis reveals extracellular CKB-mediated ATP uptake at the glioma-astrocyte invasive front

Glioblastoma (GBM) is a highly invasive primary brain tumor that, although rarely metastasizing outside the brain, frequently infiltrates surrounding brain tissue. This infiltrative growth may exploit the brain’s metabolic support system, which involves various brain-resident cells providing essential nutrients and maintaining energy balance. In this study, we investigated the metabolic dependencies of infiltrative GBM cells by combining spatially resolved transcriptomic profiling with advanced computational methods in xenografted GBM models. Our findings reveal that GBM cells upregulate creatine kinase brain type (CKB) at the leading edge to adapt to local energy deprivation. CKB facilitates the conversion of creatine to phosphocreatine, utilizing ATP supplied by astrocytes to support tumor cell survival and invasion. Targeting CKB with cyclocreatine significantly reduced tumor size and restricted infiltrative growth in vivo, indicating that GBM cells utilize CKB to harness extracellular ATP via the creatine pathway. These findings suggest that targeting CKB in GBM may offer a novel therapeutic strategy to combat infiltrative growth in this aggressive cancer.

Datasets4
Size~144 MB
AssayVisium
Samplemouse · brain
KindOther
PMID:40991701 ↗
Python · lamindb
import lamindb as ln
import spatialdata as sd

coll = ln.Collection.get(key="geo-gse283959")
coll.ordered_artifacts.df()                 # the 4 members, ordered

# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]

# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()}
Open in Vitessce
Visium
Mouse brain
GSM8674929
mouse brain glioblastoma 46 MB 2,263 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuebrain
Conditionglioblastoma
Size46 MB
Obs2,263
Magnificationother · 3.263 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse brain
GSM8674927
mouse brain glioblastoma 29 MB 3,894 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuebrain
Conditionglioblastoma
Size29 MB
Obs3,894
Magnificationother · 3.411 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse brain
GSM8674930
mouse brain glioblastoma 32 MB 2,255 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuebrain
Conditionglioblastoma
Size32 MB
Obs2,255
Magnificationother · 3.333 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse brain
GSM8674928
mouse brain glioblastoma 37 MB 2,116 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuebrain
Conditionglioblastoma
Size37 MB
Obs2,116
Magnificationother · 3.317 µm/px
bronze H&E Open in Vitessce

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