Collections / Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion
Hif2α–Lox mediated collagen remodelling is crucial for embryo invasion
The mouse uterine gene expressions on pregnancy day 6 were investigated by Visium spatial transcriptome. Contributions of Hif2a-Lox axis was examined by comparing uterine-specific KO mice of Hif2a or Lox with their littermate control.
Datasets6
Size~83 MB
AssayVisium
Samplemouse · uterus
KindComparison
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Python · lamindb
import lamindb as ln
import spatialdata as sd
coll = ln.Collection.get(key="geo-gse274059")
coll.ordered_artifacts.df() # the 6 members, ordered
# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]
# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()} Member datasets · 6
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