Collections / CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice

CH6824025, potent and selective DDR1 inhibitor, reduces kidney fibrosis in UUO mice

Discoidin domain receptor 1 (DDR1) is a collagen receptor with tyrosine kinase activity, and its expression is enhanced in various disease conditions. Although previous research suggests that DDR1 contributes to renal disease progression, DDR1 inhibitors for renal fibrosis have yet to be developed. In this study, we used unilateral ureteral obstruction (UUO) mice to investigate whether CH6824025, a strong and selective DDR1 phosphorylation inhibitor, can improve renal fibrosis. Furthermore, to analyze its action in detail, we performed 10x Visium spatial transcriptomics (ST) analysis on the kidney. Orally administered CH6824025 suppressed the phosphorylation of DDR1 in renal tissue, and the amount of hydroxyproline, the Sirius red-positive area, and the mRNA expression of fibrosis and inflammation-related genes in the kidney were significantly decreased. 10x Visium ST analysis suggested that DDR1 is mainly expressed in distal nephrons under normal conditions, but that its expression appears to increase in the injured proximal tubules in UUO mice. Comparing mRNA expression in DDR1 positive spots in the vehicle and the CH6824025 administration group, oxidative phosphorylation and mitochondrial dysfunction were improved, and pathways involved in fibrosis inhibited in the CH6824025 administration group. Downstream analysis suggested that mRNA expression changes in the CH6824025 administration group contribute to the inhibition of cell movement. Taken together, our findings suggest that CH6824025 inhibited the migration of inflammatory cells to the injury site in UUO mice, reduced inflammation, and brought about the maintenance of cell homeostasis and inhibition of fibrosis. DDR1 inhibitors are expected to be a promising treatment for renal fibrosis.

Datasets8
Size~465 MB
AssayVisium
Samplemouse · kidney
KindComparison
PMID:39379147 ↗
Python · lamindb
import lamindb as ln
import spatialdata as sd

coll = ln.Collection.get(key="geo-gse273978")
coll.ordered_artifacts.df()                 # the 8 members, ordered

# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]

# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()}
Open in Vitessce
Visium
Mouse kidney
GSM8440998
mouse kidney renal fibrosis 58 MB 2,151 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuekidney
Conditionrenal fibrosis
Size58 MB
Obs2,151
Magnificationother · 4.053 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse kidney
GSM8441004
mouse kidney renal fibrosis 67 MB 2,320 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuekidney
Conditionrenal fibrosis
Size67 MB
Obs2,320
Magnificationother · 4.053 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse kidney
GSM8440997
mouse kidney 58 MB 2,300 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuekidney
Size58 MB
Obs2,300
Magnificationother · 4.052 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse kidney
GSM8440999
mouse kidney renal fibrosis 43 MB 2,218 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuekidney
Conditionrenal fibrosis
Size43 MB
Obs2,218
Magnificationother · 4.053 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse kidney
GSM8441002
mouse kidney renal fibrosis 58 MB 2,051 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuekidney
Conditionrenal fibrosis
Size58 MB
Obs2,051
Magnificationother · 4.054 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse kidney
GSM8441003
mouse kidney renal fibrosis 53 MB 2,027 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuekidney
Conditionrenal fibrosis
Size53 MB
Obs2,027
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse kidney
GSM8441000
mouse kidney renal fibrosis 70 MB 2,423 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuekidney
Conditionrenal fibrosis
Size70 MB
Obs2,423
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Mouse kidney
GSM8441001
mouse kidney renal fibrosis 58 MB 1,974 obs bronze H&E
TechnologyVisium
Organismmouse
Tissuekidney
Conditionrenal fibrosis
Size58 MB
Obs1,974
bronze H&E Open in Vitessce

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