Collections / Safety and reactogenicity of a controlled human infection model of sand fly-transmitted cutaneous leishmaniasis

Safety and reactogenicity of a controlled human infection model of sand fly-transmitted cutaneous leishmaniasis

The leishmaniases are globally important parasitic diseases for which no human vaccines are currently available. To facilitate vaccine development, we conducted an open label observational study to establish a controlled human infection model of sand fly-transmitted cutaneous leishmaniasis caused by L. major. Between 24th January and 12th August 2022, we exposed 14 (8F, 6M) participants to infected sand flies. The primary objective was to demonstrate effectiveness (attack rate) and safety (absence of CL lesion at 12 months), whereas secondary and exploratory objectives included rate of lesion development, parasite load and analysis of local immune responses using immunohistology and spatial transcriptomics. We estimated a take rate for CL development of 64% (9/14) based on all participants, increasing to 82% (9/11) if only participants with confirmed bites are included. Lesion development was terminated by therapeutic biopsy in 10 participants with confirmed bites. 30% (3/10) had either one (2/10) or two (1/10) lesion recurrences between 4-8 months after biopsy that were treated successfully with cryotherapy. No severe or serious adverse events were recorded, but scarring was evident as expected. All participants were lesion-free at long-term (>12 month) follow up. We provide the first comprehensive map of immune cell distribution and cytokine/chemokine expression in human CL lesions, revealing discrete immune niches. This controlled human infection model offers opportunities for rapid vaccine candidate selection and a greater understanding of immune-mediated protection and pathology.

Datasets12
Size~324 MB
AssayVisium
Samplehuman · skin of body
KindComparison
PMID:39095597 ↗
Python · lamindb
import lamindb as ln
import spatialdata as sd

coll = ln.Collection.get(key="geo-gse263298")
coll.ordered_artifacts.df()                 # the 12 members, ordered

# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]

# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()}
Visium
Human skin of body
GSM8189293
human skin of body cutaneous leishmaniasis 52 MB 2,830 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size52 MB
Obs2,830
silver H&E
Open in Vitessce
Visium
Human skin of body
GSM8189297
human skin of body cutaneous leishmaniasis 37 MB 1,728 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size37 MB
Obs1,728
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189292
human skin of body cutaneous leishmaniasis 17 MB 2,910 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size17 MB
Obs2,910
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189302
human skin of body cutaneous leishmaniasis 25 MB 1,973 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size25 MB
Obs1,973
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189295
human skin of body cutaneous leishmaniasis 15 MB 1,109 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size15 MB
Obs1,109
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189300
human skin of body cutaneous leishmaniasis 43 MB 1,895 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size43 MB
Obs1,895
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189298
human skin of body cutaneous leishmaniasis 11 MB 646 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size11 MB
Obs646
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189296
human skin of body cutaneous leishmaniasis 35 MB 1,663 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size35 MB
Obs1,663
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189299
human skin of body cutaneous leishmaniasis 11 MB 682 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size11 MB
Obs682
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189303
human skin of body cutaneous leishmaniasis 20 MB 1,252 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size20 MB
Obs1,252
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189294
human skin of body cutaneous leishmaniasis 16 MB 1,194 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size16 MB
Obs1,194
silver H&E Open in Vitessce
Open in Vitessce
Visium
Human skin of body
GSM8189301
human skin of body cutaneous leishmaniasis 42 MB 2,359 obs silver H&E
TechnologyVisium
Organismhuman
Tissueskin of body
Conditioncutaneous leishmaniasis
Size42 MB
Obs2,359
silver H&E Open in Vitessce

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