Collections / Recirculating regulatory T cells mediate thymic regeneration [visium]

Recirculating regulatory T cells mediate thymic regeneration [visium]

Recirculating regulatory T cells mediate thymic regeneration [visium]

Datasets6
Size~481 MB
AssayVisium
Samplemouse · thymus
KindTime course
PMID:39892391 ↗
Python · lamindb
import lamindb as ln
import spatialdata as sd

coll = ln.Collection.get(key="geo-gse244641")
coll.ordered_artifacts.df()                 # the 6 members, ordered

# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]

# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()}
Open in Vitessce
Visium
Mouse thymus
GSM7823010
mouse thymus 90 MB 1,625 obs silver H&E
TechnologyVisium
Organismmouse
Tissuethymus
Size90 MB
Obs1,625
silver H&E Open in Vitessce
Open in Vitessce
Visium
Mouse thymus
GSM7823011
mouse thymus 104 MB 1,815 obs silver H&E
TechnologyVisium
Organismmouse
Tissuethymus
Size104 MB
Obs1,815
silver H&E Open in Vitessce
Open in Vitessce
Visium
Mouse thymus
GSM7823012
mouse thymus 52 MB 841 obs silver H&E
TechnologyVisium
Organismmouse
Tissuethymus
Size52 MB
Obs841
silver H&E Open in Vitessce
Open in Vitessce
Visium
Mouse thymus
GSM7823013
mouse thymus 77 MB 1,613 obs silver H&E
TechnologyVisium
Organismmouse
Tissuethymus
Size77 MB
Obs1,613
silver H&E Open in Vitessce
Open in Vitessce
Visium
Mouse thymus
GSM7823015
mouse thymus 77 MB 1,443 obs silver H&E
TechnologyVisium
Organismmouse
Tissuethymus
Size77 MB
Obs1,443
silver H&E Open in Vitessce
Open in Vitessce
Visium
Mouse thymus
GSM7823014
mouse thymus 80 MB 1,612 obs silver H&E
TechnologyVisium
Organismmouse
Tissuethymus
Size80 MB
Obs1,612
silver H&E Open in Vitessce

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