Collections / Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]

Siglec-9 acts as an immune checkpoint molecule on macrophages in glioblastoma, restricting T cell priming and immunotherapy response [ST]

The neoadjuvant immune checkpoint blockade therapy only benefits a limited fraction of glioblastoma multiforme (GBM) patients. Thus, targeting other immunomodulators on myeloid cells is an attractive therapeutic option. Here, we performed single-cell RNA sequencing and spatial transcriptomics of GBM patients treated with neoadjuvant anti-PD-1 therapy. We identified unique monocyte-derived tumor-associated macrophage (TAM) subpopulations with functional plasticity that highly expressed the immunosuppressive SIGLEC9 gene and preferentially accumulated in the non-responders to anti-PD-1 treatment. Deletion of Siglece (murine homologue) resulted in significantly restrained tumor development and prolonged survival in mouse models. Mechanistically, targeting Siglece directly activated both CD4+ T cells and CD8+ T cells through antigen presentation, secreted chemokines and co-stimulatory factor interactions. Furthermore, Siglece deletion synergized with anti-PD-1/PD-L1 treatment to improve antitumor efficacy. Our data demonstrated that Siglec-9 is an immune checkpoint molecule on macrophages that can be targeted to enhance anti-PD-1/PD-L1 therapeutic efficacy for GBM treatment.

Datasets20
Size~586 MB
AssayVisium
Samplehuman · brain
KindComparison
PMID:37460871 ↗
Python · lamindb
import lamindb as ln
import spatialdata as sd

coll = ln.Collection.get(key="geo-gse235672")
coll.ordered_artifacts.df()                 # the 20 members, ordered

# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]

# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()}
Open in Vitessce
Visium
Human brain
GSM7507326
human brain glioblastoma 25 MB 1,948 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size25 MB
Obs1,948
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507324
human brain glioblastoma 22 MB 1,887 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size22 MB
Obs1,887
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507311
human brain glioblastoma 23 MB 2,587 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size23 MB
Obs2,587
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507318
human brain glioblastoma 18 MB 1,555 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size18 MB
Obs1,555
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507314
human brain glioblastoma 39 MB 2,963 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size39 MB
Obs2,963
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507312
human brain glioblastoma 24 MB 1,883 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size24 MB
Obs1,883
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507317
human brain glioblastoma 22 MB 2,027 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size22 MB
Obs2,027
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507329
human brain glioblastoma 13 MB 2,320 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size13 MB
Obs2,320
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507325
human brain glioblastoma 40 MB 2,578 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size40 MB
Obs2,578
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507321
human brain glioblastoma 32 MB 2,176 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size32 MB
Obs2,176
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507315
human brain glioblastoma 30 MB 1,858 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size30 MB
Obs1,858
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507322
human brain glioblastoma 35 MB 2,494 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size35 MB
Obs2,494
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507313
human brain glioblastoma 24 MB 1,876 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size24 MB
Obs1,876
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507319
human brain glioblastoma 24 MB 1,733 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size24 MB
Obs1,733
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507327
human brain glioblastoma 26 MB 2,149 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size26 MB
Obs2,149
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507323
human brain glioblastoma 40 MB 2,499 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size40 MB
Obs2,499
Magnificationother · 3.759 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507328
human brain glioblastoma 45 MB 2,897 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size45 MB
Obs2,897
Magnificationother · 3.345 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507330
human brain glioblastoma 32 MB 2,751 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size32 MB
Obs2,751
Magnificationother · 3.275 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507316
human brain glioblastoma 39 MB 2,560 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size39 MB
Obs2,560
Magnificationother · 3.759 µm/px
bronze H&E Open in Vitessce
Open in Vitessce
Visium
Human brain
GSM7507320
human brain glioblastoma 32 MB 2,253 obs bronze H&E
TechnologyVisium
Organismhuman
Tissuebrain
Conditionglioblastoma
Size32 MB
Obs2,253
Magnificationother · 3.391 µm/px
bronze H&E Open in Vitessce

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