Collections / 10x-mouse-bone-data-with-custom-add-on-panel-1-standard

10x-mouse-bone-data-with-custom-add-on-panel-1-standard

Datasets3
Size~24 GB
Assay10x Xenium
Samplemouse · bone tissue
KindOther
Python · lamindb
import lamindb as ln
import spatialdata as sd

coll = ln.Collection.get(key="10x-mouse-bone-data-with-custom-add-on-panel-1-standard")
coll.ordered_artifacts.df()                 # the 3 members, ordered

# download every member .zarr to the local cache:
paths = [a.cache() for a in coll.ordered_artifacts.all()]

# …or load each straight into memory as a SpatialData object:
sdatas = {a.key: sd.read_zarr(a.cache()) for a in coll.ordered_artifacts.all()}
Open in Vitessce
10x Xenium
Mouse bone tissue
mouse-bone-data-with-custom-add-on-panel-1-standard__mfemur-formic-acid-24hrdecal-section
mouse bone tissue 7.5 GB 253,560 obs silver H&E
Technology10x Xenium
Organismmouse
Tissuebone tissue
Size7.5 GB
Obs253,560
silver H&E Open in Vitessce
Open in Vitessce
10x Xenium
Mouse bone tissue
mouse-bone-data-with-custom-add-on-panel-1-standard__mfemur-edta-pfa-3daydecal-section
mouse bone tissue 7.0 GB 247,876 obs silver H&E
Technology10x Xenium
Organismmouse
Tissuebone tissue
Size7.0 GB
Obs247,876
silver H&E Open in Vitessce
Open in Vitessce
10x Xenium
Mouse bone tissue
mouse-bone-data-with-custom-add-on-panel-1-standard__mfemur-edta-3daydecal-section
mouse bone tissue 9.5 GB 348,141 obs silver H&E
Technology10x Xenium
Organismmouse
Tissuebone tissue
Size9.5 GB
Obs348,141
silver H&E Open in Vitessce